A small percentage of bad actors using automaton can produce a lot of traffic. So although it may be true that a large portion of the requests coming from TOR exit nodes is malicious, it would be unwise to conclude that most users of TOR have bad intentions.
True, but from the perspective of an org like CloudFlare, that doesn't matter. They don't know (or care) about the user breakdown coming from Tor; they just know that the vast majority of traffic coming from it is malicious. And since part of the point of Tor is to make it hard to determine who's who, the good traffic gets binned with the bad.